Transcript: ENSDART00000148226.3 mlphb-202

Description

melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]

Location

Chromosome 9: 24,009,013-24,023,369 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 14 domains and features, is associated with 48 variant alleles and maps to 244 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000062481.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148226.3	mlphb-202	1889	578aa	ENSDARP00000120534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PST1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000191843.1	mlphb-204	1874	548aa	ENSDARP00000153847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q520	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000190419.1	mlphb-203	1838	536aa	ENSDARP00000145536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139725.2	mlphb-201	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 1,889 bps, Translation length: 578 residues

Version

ENSDART00000148226.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148226.3 mlphb-202

Summary

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Transcript: ENSDART00000148226.3 mlphb-202

Summary

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