Transcript: ENSDART00000148089.3 stub1-204

Description

STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]

Gene Synonyms

CHIP, wu:fc22f04, zgc:56076

Location

Chromosome 24: 39,656,835-39,663,340 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 402 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000045228.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145075.3	stub1-203	1514	287aa	ENSDARP00000118937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000066500.5	stub1-201	855	284aa	ENSDARP00000066499.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZTZ6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000148089.3	stub1-204	807	161aa	ENSDARP00000114876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDW8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133942.2	stub1-202	539	74aa	ENSDARP00000121736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEY7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 807 bps, Translation length: 161 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148089.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000148089.3 stub1-204

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Transcript: ENSDART00000148089.3 stub1-204

Summary

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