Transcript: ENSDART00000148083.2 arid4b-202

Description

AT-rich interaction domain 4B [Source:HGNC Symbol;Acc:HGNC:15550]

Location

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 468 variant alleles and maps to 69 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128415.3	arid4b-201	3774	1239aa	ENSDARP00000107839.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2N8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189805.1	arid4b-203	3591	1178aa	ENSDARP00000157304.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148083.2	arid4b-202	1161	387aa	ENSDARP00000112863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,161 bps, Translation length: 387 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000148083.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.