Transcript: ENSDART00000148020.3 LHX2-201

Description

LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]

Location

About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 334 variant alleles and maps to 226 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148020.3	LHX2-201	3677	427aa	ENSDARP00000123264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R107	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136250.2	LHX2-202	869	134aa	ENSDARP00000120466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 3,677 bps, Translation length: 427 residues

Version

ENSDART00000148020.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.