Transcript: ENSDART00000147997.2 rc3h2-202

Description

ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]

Location

About this transcript

This transcript has 17 exons, is annotated with 22 domains and features, is associated with 893 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000091780.5	rc3h2-201	5761	1028aa	ENSDARP00000086213.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4N1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184287.1	rc3h2-203	3423	1028aa	ENSDARP00000153657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4N1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147997.2	rc3h2-202	2975	991aa	ENSDARP00000113795.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,975 bps, Translation length: 991 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147997.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.