Transcript: ENSDART00000147790.2 dchs1b-203

Description

dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]

Gene Synonyms

dchs1, im:7136458, im:7156059

Location

About this transcript

This transcript has 2 exons, is annotated with 48 domains and features, is associated with 217 variant alleles and maps to 352 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128894.4	dchs1b-202	12141	3298aa	ENSDARP00000109139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGX1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147790.2	dchs1b-203	4224	921aa	ENSDARP00000113902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXA3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000108798.4	dchs1b-201	2170	274aa	ENSDARP00000099302.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEN9	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 4,224 bps, Translation length: 921 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000147790.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.