Transcript: ENSDART00000147774.2 tial1-205

Description

TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]

Gene Synonyms

zgc:66130

Location

Chromosome 13: 25,478,646-25,484,733 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 180 variant alleles and maps to 28 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000009525.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022799.7	tial1-201	2462	370aa	ENSDARP00000020234.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXQ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135321.3	tial1-204	1208	389aa	ENSDARP00000122887.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJJ0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131403.2	tial1-202	409	131aa	ENSDARP00000119428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEY1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147774.2	tial1-205	807	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000133619.2	tial1-203	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 807 bps,

Version

ENSDART00000147774.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147774.2 tial1-205

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Transcript: ENSDART00000147774.2 tial1-205

Summary

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