Transcript: ENSDART00000147718.5 plrdgb-201

Description

PITP-less RdgB-like protein [Source:ZFIN;Acc:ZDB-GENE-000406-3]

Gene Synonyms

si:ch1073-443k13.2, zmp:0000000523

Location

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 1547 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000168996.2	plrdgb-202	3322	942aa	ENSDARP00000135456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ILR6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147718.5	plrdgb-201	824	175aa	ENSDARP00000122783.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSC0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 824 bps, Translation length: 175 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147718.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.