Transcript: ENSDART00000147699.4 mical3b-201

Description

microtubule associated monooxygenase, calponin and LIM domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-050211-1]

Location

Chromosome 4: 9,724,192-9,764,769 reverse strand.

About this transcript

This transcript has 29 exons, is annotated with 50 domains and features, is associated with 1236 variant alleles and maps to 394 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094732.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147699.4	mical3b-201	5964	1673aa	ENSDARP00000122943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWK4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000164328.2	mical3b-203	5885	1662aa	ENSDARP00000133311.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000150265.2	mical3b-202	493	131aa	ENSDARP00000125291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 29, Coding exons: 28, Transcript length: 5,964 bps, Translation length: 1,673 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1QWK4

Version

ENSDART00000147699.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147699.4 mical3b-201

Summary

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Transcript: ENSDART00000147699.4 mical3b-201

Summary

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