Transcript: ENSDART00000147672.5 htra3a-202

Description

HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]

Gene Synonyms

zgc:91963

Location

Chromosome 1: 40,741,198-40,746,461 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 1 variant allele and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052895.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080563.5	htra3a-201	3269	489aa	ENSDARP00000075010.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189780.1	htra3a-204	3269	489aa	ENSDARP00000155904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163584.2	htra3a-203	2050	489aa	ENSDARP00000141190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147672.5	htra3a-202	663	173aa	ENSDARP00000121594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6PEM1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 663 bps, Translation length: 173 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147672.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147672.5 htra3a-202

Summary

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Transcript: ENSDART00000147672.5 htra3a-202

Summary

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