Transcript: ENSDART00000147665.2 mapk11-202

Description

mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]

Gene Synonyms

zgc:86905

Location

About this transcript

This transcript has 8 exons, is associated with 244 variant alleles and maps to 53 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000032857.7	mapk11-201	2129	361aa	ENSDARP00000034350.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQ84	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160222.2	mapk11-205	1263	101aa	ENSDARP00000136821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3VB58	-
ENSDART00000150724.2	mapk11-203	562	38aa	ENSDARP00000125281.1	Nonsense mediated decay	H0WEK3	-
ENSDART00000147665.2	mapk11-202	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000150785.2	mapk11-204	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 901 bps,

Version

ENSDART00000147665.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.