Transcript: ENSDART00000147629.2 PRDM4-201

Description

PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]

Location

About this transcript

This transcript has 11 exons, is annotated with 45 domains and features, is associated with 255 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110199.4	PRDM4-202	2758	822aa	ENSDARP00000099506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3R6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147629.2	PRDM4-201	2339	780aa	ENSDARP00000118918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,339 bps, Translation length: 780 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000147629.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.