Transcript: ENSDART00000147627.2 JARID2-201

Description

jumonji and AT-rich interaction domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]

Location

About this transcript

This transcript has 17 exons, is annotated with 47 domains and features, is associated with 1286 variant alleles and maps to 161 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089836.6	JARID2-202	4421	1319aa	ENSDARP00000084269.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVC2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147627.2	JARID2-201	3915	1304aa	ENSDARP00000114402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 3,915 bps, Translation length: 1,304 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000147627.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.