Transcript: ENSDART00000147564.3 mta2-204

Description

metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]

Gene Synonyms

wu:fd61b05, wu:fi29g02, zgc:63487

Location

Chromosome 7: 17,907,883-17,943,921 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 21 domains and features, is associated with 1080 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000013031.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147564.3	mta2-204	3375	631aa	ENSDARP00000119097.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000077113.5	mta2-201	4617	663aa	ENSDARP00000071581.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLG2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000141044.3	mta2-202	697	21aa	ENSDARP00000142805.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSI9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147189.3	mta2-203	655	105aa	ENSDARP00000142931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSW0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173701.2	mta2-205	412	77aa	ENSDARP00000142723.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSB1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,375 bps, Translation length: 631 residues

Version

ENSDART00000147564.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000147564.3 mta2-204

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Transcript: ENSDART00000147564.3 mta2-204

Summary

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