Transcript: ENSDART00000147538.2 ndufaf1-207

Description

NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]

Gene Synonyms

fk33c03, wu:fk33c03, zgc:113197

Location

Chromosome 13: 33,246,212-33,247,575 forward strand.

About this transcript

This transcript has 3 exons, is associated with 170 variant alleles and maps to 270 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025549.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144379.3	ndufaf1-206	1401	304aa	ENSDARP00000118047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5CZW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000035940.8	ndufaf1-201	1361	304aa	ENSDARP00000034283.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5CZW0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136356.3	ndufaf1-204	1195	289aa	ENSDARP00000121771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132834.3	ndufaf1-203	874	171aa	ENSDARP00000117216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131985.2	ndufaf1-202	846	184aa	ENSDARP00000118923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141912.3	ndufaf1-205	730	95aa	ENSDARP00000119120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148368.3	ndufaf1-208	444	31aa	ENSDARP00000116845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147538.2	ndufaf1-207	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 753 bps,

Version

ENSDART00000147538.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000147538.2 ndufaf1-207

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Transcript: ENSDART00000147538.2 ndufaf1-207

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