Transcript: ENSDART00000147517.2 si:ch211-11k18.4-202

Description

si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]

Location

Chromosome 3: 26,179,931-26,183,699 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 9 variant alleles and maps to 31 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087869.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000140731.3	si:ch211-11k18.4-201	2071	450aa	ENSDARP00000123562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0T8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191604.1	si:ch211-11k18.4-203	4400	450aa	ENSDARP00000145092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F0T8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147517.2	si:ch211-11k18.4-202	634	196aa	ENSDARP00000122128.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 634 bps, Translation length: 196 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147517.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147517.2 si:ch211-11k18.4-202

Summary

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Transcript: ENSDART00000147517.2 si:ch211-11k18.4-202

Summary

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