Transcript: ENSDART00000147413.2 rbm25b-203

Description

RNA binding motif protein 25b [Source:ZFIN;Acc:ZDB-GENE-030131-5547]

Gene Synonyms

fi03e10, rbm25, si:ch211-105d18.5, wu:fi03e10, zgc:56208

Location

About this transcript

This transcript has 4 exons, is associated with 390 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027836.7	rbm25b-201	3094	830aa	ENSDARP00000006694.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZA0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114407.2	rbm25b-202	2376	731aa	ENSDARP00000102406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGH5	-
ENSDART00000147413.2	rbm25b-203	613	62aa	ENSDARP00000127323.1	Nonsense mediated decay	U3JAQ4	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 613 bps, Translation length: 62 residues

Version

ENSDART00000147413.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.