Transcript: ENSDART00000147411.3 slc26a6-206

Description

solute carrier family 26 member 6 [Source:ZFIN;Acc:ZDB-GENE-081105-83]

Gene Synonyms

si:dkey-20d21.8, slc26a6b

Location

Chromosome 8: 26,260,566-26,263,911 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 209 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000097292.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142031.4	slc26a6-205	2388	647aa	ENSDARP00000112964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000113763.4	slc26a6-204	1689	562aa	ENSDARP00000103206.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F9R9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147411.3	slc26a6-206	748	224aa	ENSDARP00000115561.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q908	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 748 bps, Translation length: 224 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000147411.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147411.3 slc26a6-206

Summary

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Transcript: ENSDART00000147411.3 slc26a6-206

Summary

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