Transcript: ENSDART00000147259.3 NQO1-201

Description

NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]

Location

Chromosome 7: 56,703,299-56,721,892 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 7 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000010250.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004964.8	NQO1-203	1496	275aa	ENSDARP00000021150.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P0H2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184547.1	NQO1-205	1541	289aa	ENSDARP00000145161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PW65	-
ENSDART00000147259.3	NQO1-201	877	293aa	ENSDARP00000118370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000134173.2	NQO1-202	755	185aa	ENSDARP00000114739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140530.2	NQO1-204	760	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 877 bps, Translation length: 293 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000147259.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147259.3 NQO1-201

Summary

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Transcript: ENSDART00000147259.3 NQO1-201

Summary

About Us

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