Transcript: ENSDART00000147250.3 pan3-204

Description

poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]

Gene Synonyms

zgc:171628

Location

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 188 variant alleles and maps to 143 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000048273.7	pan3-201	4368	799aa	ENSDARP00000048272.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EXP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147250.3	pan3-204	1409	213aa	ENSDARP00000112767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCV8	-
ENSDART00000137952.2	pan3-203	2757	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000132364.2	pan3-202	555	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,409 bps, Translation length: 213 residues

Version

ENSDART00000147250.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.