Transcript: ENSDART00000147216.3 si:ch211-218d20.15-204

Description

si:ch211-218d20.15 [Source:ZFIN;Acc:ZDB-GENE-070912-193]

Location

About this transcript

This transcript has 7 exons, is associated with 205 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135147.2	si:ch211-218d20.15-201	1438	261aa	ENSDARP00000119255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147216.3	si:ch211-218d20.15-204	1051	65aa	ENSDARP00000119499.1	Nonsense mediated decay	-	-
ENSDART00000135870.3	si:ch211-218d20.15-202	893	65aa	ENSDARP00000114084.1	Nonsense mediated decay	-	-
ENSDART00000138856.2	si:ch211-218d20.15-203	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 1,051 bps, Translation length: 65 residues

Version

ENSDART00000147216.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.