Transcript: ENSDART00000147144.3 CTSB-210

Description

cathepsin Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2650]

Location

Chromosome 17: 32,622,931-32,629,551 forward strand.

About this transcript

This transcript has 7 exons, is associated with 260 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000055120.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077418.6	CTSB-201	1429	330aa	ENSDARP00000071885.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PH75	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144217.2	CTSB-205	920	283aa	ENSDARP00000114825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147144.3	CTSB-210	777	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138373.2	CTSB-207	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152067.2	CTSB-208	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136459.3	CTSB-202	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135339.3	CTSB-209	939	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000137617.3	CTSB-206	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000142449.3	CTSB-204	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000137270.3	CTSB-203	778	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 777 bps,

Version

ENSDART00000147144.3

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000147144.3 CTSB-210

Summary

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Transcript: ENSDART00000147144.3 CTSB-210

Summary

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