Transcript: ENSDART00000147030.2 sytl5-203

Description

synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]

Gene Synonyms

si:dkey-19h21.5

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 754 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000089488.6	sytl5-201	2252	670aa	ENSDARP00000083921.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131683.2	sytl5-202	1110	369aa	ENSDARP00000121754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3K5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147030.2	sytl5-203	822	149aa	ENSDARP00000118002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGU6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 822 bps, Translation length: 149 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147030.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.