Transcript: ENSDART00000147000.2 lrp13-203

Description

low-density lipoprotein receptor related-protein 13 [Source:ZFIN;Acc:ZDB-GENE-130729-1]

Gene Synonyms

si:ch211-12e13.2

Location

About this transcript

This transcript has 4 exons, is annotated with 33 domains and features, is associated with 194 variant alleles and maps to 172 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134896.3	lrp13-202	4400	1355aa	ENSDARP00000120558.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2ARH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147000.2	lrp13-203	658	201aa	ENSDARP00000116322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2ARH4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147325.2	lrp13-204	474	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000132159.2	lrp13-201	348	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 658 bps, Translation length: 201 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000147000.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.