Transcript: ENSDART00000146988.2 pip4k2ab-204

Description

phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]

Location

About this transcript

This transcript has 2 exons, is associated with 536 variant alleles and maps to 36 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139633.4	pip4k2ab-203	2253	413aa	ENSDARP00000113001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UXW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109568.4	pip4k2ab-201	1011	336aa	ENSDARP00000102384.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136814.2	pip4k2ab-202	532	178aa	ENSDARP00000122520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146988.2	pip4k2ab-204	463	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 463 bps,

Version

ENSDART00000146988.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.