Transcript: ENSDART00000146962.2 stx3a-202

Description

syntaxin 3a [Source:ZFIN;Acc:ZDB-GENE-070620-13]

Gene Synonyms

zgc:165520

Location

About this transcript

This transcript has 11 exons, is annotated with 18 domains and features, is associated with 341 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146962.2	stx3a-202	1697	285aa	ENSDARP00000118118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A651	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162200.2	stx3a-203	978	325aa	ENSDARP00000132795.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142091.3	stx3a-201	1443	325aa	ENSDARP00000113682.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,697 bps, Translation length: 285 residues

Version

ENSDART00000146962.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.