Transcript: ENSDART00000146955.3 ldlra-202

Description

low density lipoprotein receptor a [Source:ZFIN;Acc:ZDB-GENE-031217-1]

Location

About this transcript

This transcript has 18 exons, is annotated with 105 domains and features, is associated with 596 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046297.7	ldlra-201	2736	911aa	ENSDARP00000046296.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000146955.3	ldlra-202	4776	870aa	ENSDARP00000115492.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGD4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 4,776 bps, Translation length: 870 residues

Version

ENSDART00000146955.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.