Transcript: ENSDART00000146946.2 acsl1a-204

Description

acyl-CoA synthetase long chain family member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-115]

Gene Synonyms

acsl1, zgc:110081

Location

Chromosome 1: 17,555,944-17,570,013 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 452 variant alleles and maps to 121 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030514.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039917.7	acsl1a-201	4370	697aa	ENSDARP00000039916.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JK22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125125.3	acsl1a-202	2925	697aa	ENSDARP00000105676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JK22	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146946.2	acsl1a-204	708	125aa	ENSDARP00000117283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131293.2	acsl1a-203	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 708 bps, Translation length: 125 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146946.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000146946.2 acsl1a-204

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Transcript: ENSDART00000146946.2 acsl1a-204

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