Transcript: ENSDART00000146943.3 dclk1a-205

Description

doublecortin-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-124]

Gene Synonyms

dcamkl1, dclk1, wu:fc51f11, zgc:153709

Location

Chromosome 10: 34,767,856-34,772,211 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 192 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000018856.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138755.3	dclk1a-202	3286	770aa	ENSDARP00000116522.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161272.2	dclk1a-206	2333	770aa	ENSDARP00000141719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBD0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145450.3	dclk1a-203	2294	472aa	ENSDARP00000121156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08BH4	-
ENSDART00000163072.2	dclk1a-207	1272	79aa	ENSDARP00000138684.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145545.3	dclk1a-204	1097	204aa	ENSDARP00000135143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134307.3	dclk1a-201	785	261aa	ENSDARP00000139645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146943.3	dclk1a-205	887	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 887 bps,

Version

ENSDART00000146943.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

retained intron final [Definitions]

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Transcript: ENSDART00000146943.3 dclk1a-205

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Transcript: ENSDART00000146943.3 dclk1a-205

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