Transcript: ENSDART00000146936.2 sec61b-204

Description

SEC61 translocon subunit beta [Source:ZFIN;Acc:ZDB-GENE-040718-260]

Gene Synonyms

fa20b05, wu:fa20b05, zgc:92922

Location

About this transcript

This transcript has 3 exons, is associated with 9 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059013.6	sec61b-201	968	97aa	ENSDARP00000059012.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGH3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136980.2	sec61b-202	510	75aa	ENSDARP00000124930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000146936.2	sec61b-204	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000147416.2	sec61b-205	158	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137408.2	sec61b-203	862	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 466 bps,

Version

ENSDART00000146936.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.