Transcript: ENSDART00000146783.2 vps8-204

Description

VPS8 subunit of CORVET complex [Source:ZFIN;Acc:ZDB-GENE-060503-348]

Gene Synonyms

im:7166005, si:dkey-24b15.1, zgc:158695

Location

About this transcript

This transcript has 9 exons, is annotated with 2 domains and features, is associated with 423 variant alleles and maps to 24 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143639.3	vps8-203	4399	1412aa	ENSDARP00000117166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQ05	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000101779.6	vps8-201	1528	455aa	ENSDARP00000092555.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L282	-
ENSDART00000146783.2	vps8-204	830	235aa	ENSDARP00000113658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QS07	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134311.3	vps8-202	687	146aa	ENSDARP00000120853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLL8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 830 bps, Translation length: 235 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146783.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.