Transcript: ENSDART00000146752.2 lrrc9-202

Description

leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]

Location

About this transcript

This transcript has 11 exons, is annotated with 28 domains and features, is associated with 372 variant alleles and maps to 99 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148112.2	lrrc9-203	1878	626aa	ENSDARP00000121601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4F8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146752.2	lrrc9-202	1421	447aa	ENSDARP00000113283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R024	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141217.2	lrrc9-201	789	258aa	ENSDARP00000123260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4F7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,421 bps, Translation length: 447 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146752.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.