Transcript: ENSDART00000146751.3 ttc23-204

Description

tetratricopeptide repeat domain 23 [Source:ZFIN;Acc:ZDB-GENE-050419-126]

Gene Synonyms

si:dkey-25f3.1

Location

Chromosome 18: 20,825,418-20,828,121 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 248 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000022160.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000090100.6	ttc23-201	1598	463aa	ENSDARP00000084533.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4Z4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138692.2	ttc23-202	1126	251aa	ENSDARP00000123461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG77	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000141686.2	ttc23-203	801	212aa	ENSDARP00000123599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LX69	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146751.3	ttc23-204	686	140aa	ENSDARP00000119590.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LX70	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 686 bps, Translation length: 140 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146751.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146751.3 ttc23-204

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Transcript: ENSDART00000146751.3 ttc23-204

Summary

About Us

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