Transcript: ENSDART00000146744.2 nfkbiab-203

Description

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]

Gene Synonyms

Ikbab, nfkbia, wu:fb81f08, zgc:56666, zgc:77616

Location

Chromosome 17: 12,942,672-12,944,281 forward strand.

About this transcript

This transcript has 3 exons, is associated with 307 variant alleles and maps to 59 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007693.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000016597.6	nfkbiab-201	1354	312aa	ENSDARP00000015303.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZW68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000192514.1	nfkbiab-204	5069	313aa	ENSDARP00000153029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RUD4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000146744.2	nfkbiab-203	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143133.2	nfkbiab-202	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 832 bps,

Version

ENSDART00000146744.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146744.2 nfkbiab-203

Summary

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Transcript: ENSDART00000146744.2 nfkbiab-203

Summary

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