Transcript: ENSDART00000146732.3 BLZF1-202

Description

basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]

Location

Chromosome 1: 494,341-497,021 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 156 variant alleles and maps to 46 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011299.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108579.5	BLZF1-201	2896	394aa	ENSDARP00000102207.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JM41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000109415.3	BLZF1-204	2809	394aa	ENSDARP00000098212.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JM41	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146732.3	BLZF1-202	508	117aa	ENSDARP00000119328.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134581.2	BLZF1-203	383	62aa	ENSDARP00000122589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 508 bps, Translation length: 117 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146732.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146732.3 BLZF1-202

Summary

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Transcript: ENSDART00000146732.3 BLZF1-202

Summary

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