Transcript: ENSDART00000146703.2 IKZF4-202

Description

IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]

Location

About this transcript

This transcript has 5 exons, is associated with 180 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145028.3	IKZF4-201	1723	572aa	ENSDARP00000116091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M3AMX3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000053878.5	IKZF4-204	1464	487aa	ENSDARP00000053877.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C4XVB4	-
ENSDART00000135129.2	IKZF4-203	372	68aa	ENSDARP00000123360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146703.2	IKZF4-202	840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 840 bps,

Version

ENSDART00000146703.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.