Transcript: ENSDART00000146700.3 llgl1-204

Description

LLGL scribble cell polarity complex component 1 [Source:ZFIN;Acc:ZDB-GENE-060825-69]

Gene Synonyms

zgc:153337

Location

About this transcript

This transcript has 22 exons, is annotated with 27 domains and features, is associated with 1923 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102540.4	llgl1-202	1059	304aa	ENSDARP00000093316.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0P470	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000146700.3	llgl1-204	5400	1014aa	ENSDARP00000117251.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPI4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000003511.11	llgl1-201	3123	1040aa	ENSDARP00000024810.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FD67	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146121.3	llgl1-203	1372	305aa	ENSDARP00000114914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDL6	-

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 5,400 bps, Translation length: 1,014 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146700.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.