Transcript: ENSDART00000146692.2 tspan9a-202

Description

tetraspanin 9a [Source:ZFIN;Acc:ZDB-GENE-060503-632]

Gene Synonyms

si:dkey-261a10.1, tspan9

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 22 variant alleles and maps to 165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040500.8	tspan9a-201	1011	336aa	ENSDARP00000040499.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QR74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000180442.1	tspan9a-203	1100	239aa	ENSDARP00000149560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QCX0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146692.2	tspan9a-202	683	227aa	ENSDARP00000123336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIF8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 683 bps, Translation length: 227 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146692.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.