Transcript: ENSDART00000146638.2 primpol-202

Description

primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]

Gene Synonyms

zgc:123274

Location

About this transcript

This transcript has 5 exons, is associated with 397 variant alleles and maps to 63 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006147.9	primpol-201	1960	523aa	ENSDARP00000022890.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32PL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147076.3	primpol-203	851	205aa	ENSDARP00000122450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146638.2	primpol-202	614	150aa	ENSDARP00000120204.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 614 bps, Translation length: 150 residues

Version

ENSDART00000146638.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.