Transcript: ENSDART00000146630.2 RAPGEF2-202

Description

si:dkey-253i9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-280]

Location

About this transcript

This transcript has 23 exons, is annotated with 40 domains and features, is associated with 485 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141077.3	RAPGEF2-203	5029	1463aa	ENSDARP00000120972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087670.6	RAPGEF2-204	8333	1278aa	ENSDARP00000082104.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPF1	-
ENSDART00000188893.1	RAPGEF2-205	8309	1270aa	ENSDARP00000148095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4T5	-
ENSDART00000146630.2	RAPGEF2-202	4729	1316aa	ENSDARP00000118432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJ00	-
ENSDART00000146183.2	RAPGEF2-201	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,729 bps, Translation length: 1,316 residues

Version

ENSDART00000146630.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.