Transcript: ENSDART00000146586.2 casp6b.1-202

Description

caspase 6b.1, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-041010-48]

Gene Synonyms

casp6b, casp6l1, caspase-6b, zgc:103604

Location

Chromosome 3: 32,954,875-32,957,702 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 42 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000025608.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000136919.3	casp6b.1-201	1235	249aa	ENSDARP00000113324.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183902.1	casp6b.1-204	2647	249aa	ENSDARP00000150690.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147374.3	casp6b.1-203	794	253aa	ENSDARP00000123520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146586.2	casp6b.1-202	783	168aa	ENSDARP00000114638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 783 bps, Translation length: 168 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146586.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000146586.2 casp6b.1-202

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000146586.2 casp6b.1-202

Summary

About Us

Get help

Our sister sites

Follow us