Transcript: ENSDART00000146581.2 prom2-203

Description

prominin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-16]

Location

Chromosome 13: 28,761,998-28,774,347 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features, is associated with 252 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039406.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101633.5	prom2-201	2873	830aa	ENSDARP00000092407.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8X9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146581.2	prom2-203	2804	507aa	ENSDARP00000118763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000160176.3	prom2-204	2729	830aa	ENSDARP00000136497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8X9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136318.2	prom2-202	357	72aa	ENSDARP00000121198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,804 bps, Translation length: 507 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146581.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146581.2 prom2-203

Summary

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Transcript: ENSDART00000146581.2 prom2-203

Summary

About Us

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