Transcript: ENSDART00000146570.3 pde7a-203

Description

phosphodiesterase 7A [Source:ZFIN;Acc:ZDB-GENE-031222-10]

Gene Synonyms

cb1053, pde7al, wu:fk53d11, wu:fk94g02

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 1128 variant alleles and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138741.4	pde7a-201	3862	490aa	ENSDARP00000121421.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FFK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146570.3	pde7a-203	581	144aa	ENSDARP00000114398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000144791.2	pde7a-202	548	170aa	ENSDARP00000114205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 581 bps, Translation length: 144 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000146570.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.