Transcript: ENSDART00000146569.2 gca-203

Description

grancalcin [Source:ZFIN;Acc:ZDB-GENE-040930-3]

Gene Synonyms

zgc:92027

Location

About this transcript

This transcript has 2 exons, is associated with 396 variant alleles and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000004656.8	gca-201	1130	205aa	ENSDARP00000024892.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185629.1	gca-204	653	207aa	ENSDARP00000149755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000135956.2	gca-202	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000146569.2	gca-203	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 796 bps,

Version

ENSDART00000146569.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.