Transcript: ENSDART00000146554.4 tmem79a-202

Description

transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]

Location

About this transcript

This transcript has 6 exons, is annotated with 28 domains and features, is associated with 224 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146554.4	tmem79a-202	1595	337aa	ENSDARP00000123573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NI22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138406.2	tmem79a-201	532	135aa	ENSDARP00000125915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,595 bps, Translation length: 337 residues

Version

ENSDART00000146554.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.