Transcript: ENSDART00000146550.2 znf1144-204

Description

zinc finger protein 1144 [Source:ZFIN;Acc:ZDB-GENE-050420-78]

Gene Synonyms

si:dkey-4c15.6

Location

Chromosome 22: 2,239,274-2,241,777 forward strand.

About this transcript

This transcript has 3 exons, is associated with 128 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094563.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000141993.2	znf1144-203	753	230aa	ENSDARP00000113907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135320.2	znf1144-202	686	122aa	ENSDARP00000116488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000131396.2	znf1144-201	577	185aa	ENSDARP00000119782.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146550.2	znf1144-204	511	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 511 bps,

Version

ENSDART00000146550.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000146550.2 znf1144-204

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000146550.2 znf1144-204

Summary

About Us

Get help

Our sister sites

Follow us