Transcript: ENSDART00000146536.2 si:dkey-266m15.6-204

Description

si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]

Location

Chromosome 18: 6,903,329-6,908,434 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 184 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000078508.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101525.5	si:dkey-266m15.6-201	7122	2200aa	ENSDARP00000092299.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q752	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146536.2	si:dkey-266m15.6-204	1498	217aa	ENSDARP00000113619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WVI8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000132399.2	si:dkey-266m15.6-202	987	329aa	ENSDARP00000121965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5R6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000134194.2	si:dkey-266m15.6-203	611	204aa	ENSDARP00000119713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R489	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,498 bps, Translation length: 217 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146536.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000146536.2 si:dkey-266m15.6-204

Summary

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Transcript: ENSDART00000146536.2 si:dkey-266m15.6-204

Summary

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