Transcript: ENSDART00000146529.3 RPUSD1-201

Description

RNA pseudouridine synthase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-444]

Location

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 213 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146529.3	RPUSD1-201	1714	293aa	ENSDARP00000113540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAY7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000084549.4	RPUSD1-202	1598	293aa	ENSDARP00000078984.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RAY7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,714 bps, Translation length: 293 residues

Version

ENSDART00000146529.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.