Transcript: ENSDART00000146473.2 retreg2-203

Description

reticulophagy regulator family member 2 [Source:ZFIN;Acc:ZDB-GENE-061215-128]

Gene Synonyms

fam134a, zgc:158472

Location

About this transcript

This transcript has 2 exons, is annotated with 8 domains and features, is associated with 11 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092277.6	retreg2-201	2195	545aa	ENSDARP00000086709.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A604	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146473.2	retreg2-203	1298	270aa	ENSDARP00000113102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBE5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000140936.2	retreg2-202	936	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,298 bps, Translation length: 270 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000146473.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.