Transcript: ENSDART00000146469.3 ttc39a-203

Description

tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]

Gene Synonyms

si:ch211-77o19.1, si:ch73-22b20.1

Location

About this transcript

This transcript has 20 exons, is annotated with 15 domains and features, is associated with 1100 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146469.3	ttc39a-203	2600	598aa	ENSDARP00000120133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QD50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000108659.4	ttc39a-201	1788	595aa	ENSDARP00000098166.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKI1	-
ENSDART00000132681.2	ttc39a-202	842	222aa	ENSDARP00000112780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RCU9	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,600 bps, Translation length: 598 residues

Version

ENSDART00000146469.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.